Welcome and evoxel!

Contents:

• evoxels
  • Description
  • Installation
  • Usage
  • License
• How to use the VoxelFields class
  • What are VoxelFields?
  • Getting started
  • Staggered grid positions
• How to run solvers
  • What’s a solver?
  • Example: Cahn-Hilliard equation
  • Execute the precompiled solver
  • Assembling custom solvers
  • Just-in-time compilation and wall time
  • Custom solver kernel
  • Callable chemical potential
  • Float precision and wall time
• Microstructure simulation chain
  • Loading data
  • Allen-Cahn equation for phase evolution
  • Smoothed boundary method
  • Further investigations
• Rapid prototyping for custom ODE classes
  • Example: Reaction diffusion system (Gray-Scott model)
  • Defining the custom ODE class
  • Testing the right-hand side
  • Run simulations
• Differentiable numerical simulations
  • Choose output times
  • Run the optimisation
• Appendix: Code testing and verification with Manufactured Solutions
  • Method of Manufactured Solution (MMS)
  • Spatial order of convergence for Laplacian stencils
  • Testing ODE right-hand sides
  • Time-dependent problems
• API Reference
  • evoxels
• Contributing
• Authors